PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM88233.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 482aa MW: 53289.3 Da PI: 9.0508 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.8 | 5e-13 | 40 | 82 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+e d++l++av+++ ++Wk+Ia++++ g ++ qc +rwqk OWM88233.1 40 IWTEEADKKLAQAVEKHCAKNWKAIANEIP-GCSDIQCLHRWQK 82 5*****************************.************8 PP | |||||||
2 | Myb_DNA-binding | 38.5 | 2.7e-12 | 82 | 124 | 7 | 48 |
HHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 7 eEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqkyl 48 Ed++l+++v++ + +W++Ia++++ R +kqc++rw+++l OWM88233.1 82 KEDDRLIQLVHKQDTSnlNWSKIAKHVQ-SRGGKQCRERWYNHL 124 69************99************.*************97 PP | |||||||
3 | Myb_DNA-binding | 39.8 | 1e-12 | 131 | 172 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++WT eE+ +l a k++G++ W+ Ia+ ++ gRt++ +k+ w+ OWM88233.1 131 NPWTREEEFILDSAQKKYGNK-WAEIAKSLP-GRTENAIKNLWN 172 79*******************.*********.*********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 482 aa Download sequence |
MEEESTECIL TQEATLEPSG TCRKGLRRTT GPMKRSANGI WTEEADKKLA QAVEKHCAKN 60 WKAIANEIPG CSDIQCLHRW QKEDDRLIQL VHKQDTSNLN WSKIAKHVQS RGGKQCRERW 120 YNHLRPGINT NPWTREEEFI LDSAQKKYGN KWAEIAKSLP GRTENAIKNL WNSSFKNRAE 180 HPSTSCPDRS SSPVTTERGS RNPEATPDMD LPLKKRKSCG APRDEANRIA ICASDTASDG 240 EDIAVSASTC KRYSHGDSDL EYDHLTAYYA KTKSSSIQIA PTVSSLTMRS DDHATPSCPE 300 KEANKRDDPI PSLSEPLMPS PVASARSRKS LCKFIHLNSF LLPKRCLSPN RWIIEPSRSR 360 TKPASPHTPS GHDEGSSADL GNATSWLRSA ASSFKNRPSI ISRPRARANK KSHRSPAGES 420 TEDSDSSIFD FNSSVKSKSK QVNISPTSMT AQENGTSAAG KPLRRSLEDA FDSAADVADN 480 VS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02320.2 | 2e-51 | MYB family protein |