PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM88139.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 234aa MW: 25543.8 Da PI: 10.2385 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.7 | 1.8e-20 | 87 | 136 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp+ k r++lg+f++aeeAa a+++a+++++g OWM88139.1 87 VYRGIRQRP-WGKWAAEIRDPN---KGVRVWLGTFDSAEEAALAYDRAALRIRG 136 69*******.**********93...25************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MCGGAIISGF VEIRRGRRCA GGDDFWSDLD AISDLLGLGS SGGADVPHNA TQHAQVPKAK 60 KNRKSAARHV ADENGKGGRA QRAGKNVYRG IRQRPWGKWA AEIRDPNKGV RVWLGTFDSA 120 EEAALAYDRA ALRIRGDKAK LNFSPPPPAP PAPPTPPQLQ AKPHHHPPPA KRRCVHPEPA 180 PSNRHHANWA PELKEQISSL ETFLGLAEAE AVRGGRELAE ELWMLEDLGT HRQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 9e-26 | ERF family protein |