PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM88092.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

ARR-B

Protein Properties

Length: 480aa MW: 54907.2 Da PI: 6.5952

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM88092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	81	1.3e-25	209	263	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W LH+ Fv+av +LGG +kA+Pk+ilelm+++gLt+e+v+SHLQkYR + OWM88092.1 209 KQRVVWDAALHALFVSAVMKLGG-NKAVPKKILELMNIPGLTRENVASHLQKYRQH 263 79*****************77.57**************************86 PP
2	Myb_DNA-binding	37.6	5.3e-12	211	261	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W + ++ l+v av +lGg+ +k+I + m+ g+t++++ s++qky+ OWM88092.1 211 RVVWDAALHALFVSAVMKLGGNkaVPKKILELMNiPGLTRENVASHLQKYR 261 678***********************************************7 PP
3	Response_reg	54.4	7e-19	36	144	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+ dD++ +++lr+ le+ +y +v+ + + e ale+l++++ +Dl+l +g+dG+++lkei e ++p+i++++++ + +++ ++ G OWM88092.1 36 VLLLDDDQEHLHVLRKTLEECQY-QVTICIQYERALEKLRQNKdgFDLLLSSDIVSGVDGFNILKEIIMEF-DIPVIIMSGEDRRTRRIKSIEHGFC 130 899******************.***********888889*9999*********7666.7******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l+Kp+ +eel++ OWM88092.1 131 DYLVKPIRIEELRD 144 **********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MNGDGTSISE AGSKSDPASV GLTYNELPGD LVVLNVLLLD DDQEHLHVLR KTLEECQYQV 60 TICIQYERAL EKLRQNKDGF DLLLSSDIVS GVDGFNILKE IIMEFDIPVI IMSGEDRRTR 120 RIKSIEHGFC DYLVKPIRIE ELRDIWQHVV RKRKCTFQDL LRVRSLENKN YHEPNLDNMS 180 KSPKSSKRKN NSGDSSKHEQ NDAMPPMKKQ RVVWDAALHA LFVSAVMKLG GNKAVPKKIL 240 ELMNIPGLTR ENVASHLQKY RQHQKKNQES WENAFGPMSS YSNLDLHGHV SHEINMSQRQ 300 QMMNHKESHQ YLQTLQNMNM HAHMALPYQS MEPNPMMFGN AGNPIFSNGV AETDFPNGSG 360 TIEMGREEVY HPVLQSPSSF DFPINTHLEY QLNGLPFVND FHNDFSQIGL RDWEWNFQHG 420 NIIPDQPYII PDAGVTYDMQ RNLPLGDNAV RIKPETFPGT NLQPRIPAPF RTAQLPDQVK

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MNGDGTSISE AGSKSDPASV GLTYNELPGD LVVLNVLLLD DDQEHLHVLR KTLEECQYQV  60
TICIQYERAL EKLRQNKDGF DLLLSSDIVS GVDGFNILKE IIMEFDIPVI IMSGEDRRTR  120
RIKSIEHGFC DYLVKPIRIE ELRDIWQHVV RKRKCTFQDL LRVRSLENKN YHEPNLDNMS  180
KSPKSSKRKN NSGDSSKHEQ NDAMPPMKKQ RVVWDAALHA LFVSAVMKLG GNKAVPKKIL  240
ELMNIPGLTR ENVASHLQKY RQHQKKNQES WENAFGPMSS YSNLDLHGHV SHEINMSQRQ  300
QMMNHKESHQ YLQTLQNMNM HAHMALPYQS MEPNPMMFGN AGNPIFSNGV AETDFPNGSG  360
TIEMGREEVY HPVLQSPSSF DFPINTHLEY QLNGLPFVND FHNDFSQIGL RDWEWNFQHG  420
NIIPDQPYII PDAGVTYDMQ RNLPLGDNAV RIKPETFPGT NLQPRIPAPF RTAQLPDQVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-56	ARR-B family protein