PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88083.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 140aa    MW: 14969 Da    PI: 10.1387
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.42.3e-192963135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C+ CgttkTplWR gp g+k+LCnaCG++ rkk++
  OWM88083.1 29 CADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 63
                ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MYDSSDKGSE SLSGISSEES QAAEPKKTCA DCGTTKTPLW RGGPAGPKSL CNACGIRSRK  60
KRRAILGGGA AEEKKPKKSN NGSSPSSKLG DSLKQRLMAL GREVMMQRSS VERQRKQQQL  120
GEEEQAAVLL MALSYGSVYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.18e-47GATA family protein