PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88037.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 363aa    MW: 39530.5 Da    PI: 6.799
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88037.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.72.4e-33186243158
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                 ldDgy+WrKYGqK vk s++prsYYrCtsagC vkk+vers+edp++v++tYeg+H+h
  OWM88037.1 186 LDDGYRWRKYGQKAVKHSPYPRSYYRCTSAGCGVKKRVERSSEDPSIVVTTYEGQHTH 243
                 59******************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MDRKPLNDDA EELIKRRHEQ SSSSGASPSF HLDIPGAFGG GVFGLPCDAE KGSLGFMDLL  60
GVQDYVSGPA AYSLFDLLQP PQPPPLQLPA QPPPPLLSPA STVMESSDAA NQQPPTPANS  120
SSLSPSSNEG QTNKTAGEED GEGEEEEEQG NNQEKTKKQL KPKKKNQKRQ REPRFAFMTK  180
SDVDHLDDGY RWRKYGQKAV KHSPYPRSYY RCTSAGCGVK KRVERSSEDP SIVVTTYEGQ  240
HTHLTPATPR GSLGFSPETA TYGAGGGFGL SSTTSSFLHP QSNFYQHHQQ HQYLYGSAPS  300
VNTGSSASAS FISSSPSIPS FNQAQTHNFV RPSALPRSLS ALQRDHGLLE DIVPTRMREE  360
PKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.18e-47WRKY family protein