PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87776.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 266aa    MW: 29814.2 Da    PI: 5.6658
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.5e-1770120155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++  r++Wv+e+r+p   +kr+r++lg++ tae+Aa+a++  +++l+g
  OWM87776.1  70 PVYHGVRRRN-RNKWVCELREP---NKRTRIWLGTYPTAEMAARAHDVGALALRG 120
                 68*****887.8*********8...337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDIAYVCRGY DSQSFDSDCC TYTTKLAESP SPSELCTRPV VHSDEEVVLL ASSKPKKRAG  60
RRVFKETRHP VYHGVRRRNR NKWVCELREP NKRTRIWLGT YPTAEMAARA HDVGALALRG  120
KRACLNFADS AWRLQVPASS EAADLRRVAL EAAEAFQPHE ARSKEEARDS TADGEEQVRE  180
TITVSSQSLF SSCPEVDVTT LPEIRTAVSE DYANCDGGDQ ELNMARWADR PLLSPPPSCS  240
GHSTINWDCY DAEVHDVDIT LWSYST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.13e-58ERF family protein