PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87405.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 377aa    MW: 40046.7 Da    PI: 6.6413
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87405.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-19111160255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +ykGVr+++ +g+WvAeIr+p+    r r +lg+f tae+Aa+a+++a++ l+g
  OWM87405.1 111 RYKGVRQRS-WGKWVAEIRHPRG---RSRKWLGTFNTAEDAARAYDRAALILHG 160
                 59****999.**********943...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MSSPPSSSPS PNISHHQLLL LHPPLQPQPQ QQQEQEDPSP SSNCNDDNIS DLSQGQTLSN  60
NSGNSTSSAT AAASSSPLAS TADNACSSTS TAGGRKGKGK GKGGPDNNKF RYKGVRQRSW  120
GKWVAEIRHP RGRSRKWLGT FNTAEDAARA YDRAALILHG PKAQLNLQPP PSSASTAASS  180
SSSSSSSTTQ TLRPLLPRPS NYGAGSLPFA GYPPYAAYFT YPSTTPHFGA LQCSNTTVVP  240
NNSQCSSGWS ELQAQHDNYR RALCSEEVAR GTGEDHAVVA AVTAPIQNPN PSCDDQHHQE  300
QQPQIHIQNP GDANSLIGLV DASLSLTSQA VSSPLGPDPA IVASGPGSPP PPMWPLTNEE  360
YLQHGLWDYG DPFWYDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.15e-20ERF family protein