PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM87336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 205aa MW: 22898.5 Da PI: 7.2512 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 90.4 | 1.4e-28 | 31 | 91 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++W+KYGqKe+ gs +prsYYrCt++ +Cp+kk+v+r ++dp+++++tY+g+H+++ OWM87336.1 31 EDGFTWKKYGQKEILGSLYPRSYYRCTHQklyHCPAKKQVQRLDSDPDTFQVTYRGNHTCH 91 7****************************9999**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 205 aa Download sequence |
MARHLYRQDD PSRRTVTVEA PRFGNTEIPP EDGFTWKKYG QKEILGSLYP RSYYRCTHQK 60 LYHCPAKKQV QRLDSDPDTF QVTYRGNHTC HMSLTAPSIS PPQPSTLGMV ISQPLPLPQP 120 SLGQPSGTHS QWLSMDFSLG SGAGPSSAPA APREDQYPLV AVMADVMFNS SGSSSNSMDT 180 IFSSIDHRDD HDQRRQSWEA GDKKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40740.1 | 3e-45 | WRKY family protein |