PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM87290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | FAR1 | ||||||||
Protein Properties | Length: 660aa MW: 76050.9 Da PI: 7.9691 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 54.7 | 3.3e-17 | 57 | 143 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +++++YA++ GF vrk ++k s+++++ + + Cs+ gk+ ++ k+ + r++ +t+Ckak++v ++dg ++++ leHnH+l+p OWM87290.1 57 DYFKRYAYQQGFGVRKVSTK-SDTDRQARYYSLACSRGGKNLSTAKN---YLTARPSIKTDCKAKINVIVSSDGGCTISRVFLEHNHALSP 143 58*************99755.558888****************9988...8999**********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 660 aa Download sequence |
MEIDSTPVEE EPAALSSGET VNGSNLDSHE SKESSLDTEE PVPKVGMVFN TEEEICDYFK 60 RYAYQQGFGV RKVSTKSDTD RQARYYSLAC SRGGKNLSTA KNYLTARPSI KTDCKAKINV 120 IVSSDGGCTI SRVFLEHNHA LSPKNSKFQR SHWKRGNYSK RRLELNDRAS VPLNKNLHSP 180 VIGIAGYVNS LFGDKDSRQY VAKVGQFKLG IGDAEALRDY FVRMQRRNSN FFYVIDMDSE 240 GRLRNAFWAD SRSKATYEYF GDVVSFDTTY VTSKYNVPLA SFVGVNHHGQ SVLFGSALLS 300 REDVDTYVWL FRSWMEFMGG RSPNVVITDQ CRLIQIAIAE VLPQSHHCFG LWYIMRKLPE 360 KLGGFPQYEE VRMAFDSILN ESMEPGEFDE KWSRMIEYYN LQGNEWLSSL FGDRRHWAPV 420 YVKSIFWAGN QIMNSFFDDY VNSKTSLKQF VELYDSAMKS KIEKENKADY DSYSSNYKLI 480 TDCHFEKQFQ EAYTNSIFKL FQDELKGMLY CNSVMSKAEG AISEFDVSDI LRGKDGNSKR 540 KVVYFVRYNE AACDIKCSCS LFESRGLVCR HIAKILIEKD VREIPSRYIL TRWRKDIKRR 600 HSHVTSCYED RDLSQQSMRL DKLRASFSEA AEVAINSQEK YDFLLKYIEE AKRKLMDASG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 1e-115 | FAR1 family protein |