PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87290.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family FAR1
Protein Properties Length: 660aa    MW: 76050.9 Da    PI: 7.9691
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87290.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.73.3e-1757143191
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 +++++YA++ GF vrk ++k s+++++   + + Cs+ gk+ ++ k+     + r++ +t+Ckak++v  ++dg   ++++ leHnH+l+p
  OWM87290.1  57 DYFKRYAYQQGFGVRKVSTK-SDTDRQARYYSLACSRGGKNLSTAKN---YLTARPSIKTDCKAKINVIVSSDGGCTISRVFLEHNHALSP 143
                 58*************99755.558888****************9988...8999**********************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    
MEIDSTPVEE EPAALSSGET VNGSNLDSHE SKESSLDTEE PVPKVGMVFN TEEEICDYFK  60
RYAYQQGFGV RKVSTKSDTD RQARYYSLAC SRGGKNLSTA KNYLTARPSI KTDCKAKINV  120
IVSSDGGCTI SRVFLEHNHA LSPKNSKFQR SHWKRGNYSK RRLELNDRAS VPLNKNLHSP  180
VIGIAGYVNS LFGDKDSRQY VAKVGQFKLG IGDAEALRDY FVRMQRRNSN FFYVIDMDSE  240
GRLRNAFWAD SRSKATYEYF GDVVSFDTTY VTSKYNVPLA SFVGVNHHGQ SVLFGSALLS  300
REDVDTYVWL FRSWMEFMGG RSPNVVITDQ CRLIQIAIAE VLPQSHHCFG LWYIMRKLPE  360
KLGGFPQYEE VRMAFDSILN ESMEPGEFDE KWSRMIEYYN LQGNEWLSSL FGDRRHWAPV  420
YVKSIFWAGN QIMNSFFDDY VNSKTSLKQF VELYDSAMKS KIEKENKADY DSYSSNYKLI  480
TDCHFEKQFQ EAYTNSIFKL FQDELKGMLY CNSVMSKAEG AISEFDVSDI LRGKDGNSKR  540
KVVYFVRYNE AACDIKCSCS LFESRGLVCR HIAKILIEKD VREIPSRYIL TRWRKDIKRR  600
HSHVTSCYED RDLSQQSMRL DKLRASFSEA AEVAINSQEK YDFLLKYIEE AKRKLMDASG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.11e-115FAR1 family protein