PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87241.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 88aa    MW: 9756.78 Da    PI: 8.9783
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.54.1e-101460347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT+   + + +a + + ++   +W+ +a+ +g g+t+++++ ++q +
       OWM87241.1 14 SWTPKQNKAFEKALAVYDKDtpdRWHNVAKAVG-GKTAEEVQRHYQVL 60
                     7********************************.************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MASGSMSRGS ASSSWTPKQN KAFEKALAVY DKDTPDRWHN VAKAVGGKTA EEVQRHYQVL  60
VEDVQTIESG RVPFPNYRTT GATINDER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-37MYB_related family protein