PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM87060.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Trihelix

Protein Properties

Length: 289aa MW: 32661.6 Da PI: 5.7497

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM87060.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	55.2	1.9e-17	29	120	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +W+++ + +Li+a +++ +l+rg+l++++W+ev++++ ++++ +r+ +qCk++++ ++k+yk +k++ ++ + + +s++ ++d+++a OWM87060.1 29 CWSEEATSTLIDAWGRRHLELNRGNLRQKDWQEVADAVnalhgHSKKTHRTDVQCKNRIDTIKKKYKTEKARVSSSSRTLTSSWIFYDRMDA 120 7****************************************9***************************9999999******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MGDLTESVTP LALPAPSHQP SPMPVREDCW SEEATSTLID AWGRRHLELN RGNLRQKDWQ 60 EVADAVNALH GHSKKTHRTD VQCKNRIDTI KKKYKTEKAR VSSSSRTLTS SWIFYDRMDA 120 LIGSSSSAKK AVSPSPSTSV SPLSPPMALP LPMSYKKTLS QSPAISLPQK RPADKMDEGY 180 FRRNYSAVAA AAAAAEAEPD EDEEDDDETD EDEDEGEGMR RLAKAIERFG EVYERVEAEK 240 LRQMVDLEKQ RMQFAKDLEV QRLKMFMDTQ VQLERIKHNK RSGSDDIYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	1e-34	Trihelix family protein