PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM86791.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | WRKY | ||||||||
Protein Properties | Length: 254aa MW: 28489.2 Da PI: 7.9035 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.8 | 1.2e-29 | 101 | 159 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYGqK++k+s+ pr+YYrC++a gCpvkkkv+r++ed ++++ tYeg+Hnh+ OWM86791.1 101 KDRYQWRKYGQKVMKDSPSPRAYYRCSTApGCPVKKKVQRCKEDISFLVATYEGQHNHN 159 8*************************9999****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MDINAAEEEI QVNVLRAEVK RLKKENEALR SMLEGMKSKC EVLDSYLHET IKLDDQKVGT 60 ETLGGSREDH KKKSKVVEVR LAEASQIFVK TALDDQSLVV KDRYQWRKYG QKVMKDSPSP 120 RAYYRCSTAP GCPVKKKVQR CKEDISFLVA TYEGQHNHNL DGAFQRLNSS NSPHIYSTTH 180 LGLGLGISQD QELSLPVRNS HNAASLKGLT ESIIDGSSSY DTIEEYVSSL VKDPNFTTDL 240 AAAVACKLRY RSDM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 2e-42 | WRKY family protein |