PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86757.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 196aa    MW: 22414.3 Da    PI: 8.0955
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-18755254
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a++ + 
  OWM86757.1  7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARLMC 55
                69******9.**********8.....334**********************8775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARLMCGPRAR  60
TNFPYNPNAT HSSTSKLLSA TLTAKLHRCY MASLQLTKSS SPQVEPQKPA ASHVSSVSSN  120
LATPVKFEDE KVKFLPDQRR QMVPFVQEIK AEEEVTGYQY HQQQFSFKPL EDDHIEQMIE  180
ELLDYGSIEL CSSVAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.15e-54ERF family protein