PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM86690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | HB-other | ||||||||
Protein Properties | Length: 357aa MW: 40165.7 Da PI: 4.6229 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 25.7 | 2e-08 | 282 | 329 | 6 | 53 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 +++k q+++Le+++++++ p+ + + + ++L+ +++ WF +Ra OWM86690.1 282 RLKKVQVQTLENVYRRTKRPTNAIVSSIVQVTSLPRKRIVKWFEDKRA 329 57899******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence |
MAFAPSMSSS FSAQFFSPLS RKRAGLGFNK PCSLILSYPS HTSAVSLSRS PRRQLGLAVC 60 GAKNKKKAKK KQIIHESPDG EDEDLDDDAF ESLFKQLEED LKNDENLSFD DDDLEISEED 120 FARLESELKE ALGVDDDIEI FGETKDSEQG EDDDDTADQV DDKDDDDDDD EDGETPVELK 180 RWQLRRLASA LKAGRRKTSI KTLASELGLD RSIVLELLRD PPPDLLMMSA TLPNEPEQTQ 240 LVSEPRAVEV VPNEATKDDA EPETKVKAPL HVMHQRWSAQ KRLKKVQVQT LENVYRRTKR 300 PTNAIVSSIV QVTSLPRKRI VKWFEDKRAE DGVPDKRTPY QRPVTETASS VSSVHSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11270.1 | 5e-61 | HB-other family protein |