PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM86684.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

CPP

Protein Properties

Length: 944aa MW: 101654 Da PI: 6.8414

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM86684.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.9	1.3e-15	532	570	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnC+kskClk+YCeCfaag +Cse C C++C+N+ e OWM86684.1 532 CKRCNCRKSKCLKLYCECFAAGLYCSEPCACQGCFNRPE 570 79**********************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 944 aa Download sequence
MDSHSPGGNA KTTGKTESAN FASSCSDSPP VQESPYSNFL NNLSPLELKK AAAVPQGFIG 60 INSPPLVFTS PRITLPRDAH ILKRPQVLQL STEESPQHNV RAKSPQDKKS EPVLVTDNDE 120 DFVVKDFAEA QPSNSPICVD GFLVDPFMVD CANSTCSVDA HGKEVDSGSP SDITPLQFIT 180 SDHEQNHDAD EHIGNALDSG APLEKSKYVM KKMEIKEKLH DGERSPNLSS NVISDKSGLQ 240 FALFLYIDQD TKMQGAGGSN EDKFDNATNS ISESFSTTHA YQDCDNNAGA SASYFASTHN 300 SEIIPTQRGL LRRCLFDEAR PDISSTRSGS YSSNIMSSVL SATSAKLEGL NLTRANSSAV 360 SIKNKVQELS KPIDANVPPR TGANFPLIAS RPLGIGLHLN SVVSGKKIGH IATSSAEPTV 420 HHLIIQGTKS TLFETCHVLD STKSCLRVET VQSSNEGSKD DSDASIIHST PTSESPHDSG 480 GQNPLMPLEH SADTSAKRKL SSEHAESQDP NDQMSPMKRR QKESVTSTSD GCKRCNCRKS 540 KCLKLYCECF AAGLYCSEPC ACQGCFNRPE YQDKVNYTRK QIESRNPSAF APKIVESANQ 600 FLENDVVESP CIIVAFTKAN VGCSDNCRCE GCKNVYGTKQ GYGLSKPLLS NRVSDGISGE 660 EKFEVLAADD GSFLMDLHNP HSLTPMTPAF EFSDHGKGPP KSRLPLPKIL SSPGSDITTL 720 LSVESKHSGD ADSSIMQISS AGTLESGMNN CITERSCREM VDGFSPRRDS LLNLSHLTPR 780 LAHPVVTSSS SSSSSSSKAR NSISTRGSRI VLVSKSGQEP SSSRTSLQGR ISPITPITDV 840 LLNNKSGKDL NSSTRHSGVS EDDTPEILKE ASTPTKSINV SSPNRKRVSP PHSWARSSSS 900 VCLKSGRKFI LKAVPSFPPL TPCIDRGGSK NSNITDIQDD SRDK

Sequence ? help Back to Top

Protein Sequence Length: 944 aa Download sequence

MDSHSPGGNA KTTGKTESAN FASSCSDSPP VQESPYSNFL NNLSPLELKK AAAVPQGFIG  60
INSPPLVFTS PRITLPRDAH ILKRPQVLQL STEESPQHNV RAKSPQDKKS EPVLVTDNDE  120
DFVVKDFAEA QPSNSPICVD GFLVDPFMVD CANSTCSVDA HGKEVDSGSP SDITPLQFIT  180
SDHEQNHDAD EHIGNALDSG APLEKSKYVM KKMEIKEKLH DGERSPNLSS NVISDKSGLQ  240
FALFLYIDQD TKMQGAGGSN EDKFDNATNS ISESFSTTHA YQDCDNNAGA SASYFASTHN  300
SEIIPTQRGL LRRCLFDEAR PDISSTRSGS YSSNIMSSVL SATSAKLEGL NLTRANSSAV  360
SIKNKVQELS KPIDANVPPR TGANFPLIAS RPLGIGLHLN SVVSGKKIGH IATSSAEPTV  420
HHLIIQGTKS TLFETCHVLD STKSCLRVET VQSSNEGSKD DSDASIIHST PTSESPHDSG  480
GQNPLMPLEH SADTSAKRKL SSEHAESQDP NDQMSPMKRR QKESVTSTSD GCKRCNCRKS  540
KCLKLYCECF AAGLYCSEPC ACQGCFNRPE YQDKVNYTRK QIESRNPSAF APKIVESANQ  600
FLENDVVESP CIIVAFTKAN VGCSDNCRCE GCKNVYGTKQ GYGLSKPLLS NRVSDGISGE  660
EKFEVLAADD GSFLMDLHNP HSLTPMTPAF EFSDHGKGPP KSRLPLPKIL SSPGSDITTL  720
LSVESKHSGD ADSSIMQISS AGTLESGMNN CITERSCREM VDGFSPRRDS LLNLSHLTPR  780
LAHPVVTSSS SSSSSSSKAR NSISTRGSRI VLVSKSGQEP SSSRTSLQGR ISPITPITDV  840
LLNNKSGKDL NSSTRHSGVS EDDTPEILKE ASTPTKSINV SSPNRKRVSP PHSWARSSSS  900
VCLKSGRKFI LKAVPSFPPL TPCIDRGGSK NSNITDIQDD SRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22760.1	3e-39	CPP family protein