PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM86615.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

CPP

Protein Properties

Length: 628aa MW: 68232.4 Da PI: 7.7561

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM86615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	42.8	1.1e-13	160	199	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk s+Clk+YCeC+aag +C+ C+C++C+N+ e+ OWM86615.1 160 KQKRCNCKSSRCLKLYCECYAAGMYCDG-CNCTSCQNNVEN 199 79************************.******9875 PP
2	TCR	51.2	2.5e-16	245	283	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 + kgC+Ckks ClkkYCeCf+ag Cs++C+C+dC+N e OWM86615.1 245 HYKGCQCKKSGCLKKYCECFQAGILCSDNCRCKDCRNFE 283 789**********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
METGETVSEV APRKLARQLD FTAACRNSAN AASPEQLRRS SEPRNPSRLQ LELQLRSGLG 60 LECESQSQPQ QSSSVSQKPA QSHSQPPERL VQFPLQLQQP LPQSPVQSSS QMLVKSPPLL 120 PRIPHPAHRP LSPAAQDSQQ ESPISRIRLS SEVKGGTPKK QKRCNCKSSR CLKLYCECYA 180 AGMYCDGCNC TSCQNNVENE AVRQEAVELT LGKNPNAFKP KIDSSPLRLK DCGDEAEAVQ 240 IVGKHYKGCQ CKKSGCLKKY CECFQAGILC SDNCRCKDCR NFEGSEERTA LYHVGHDSMA 300 NIQQAANAAI CGAIGSSGYG VPPTLSRVSM FSGTTNGKSM QGSAKLQQED NRRASAASLP 360 VSAADTANIA LQYSKSPLVN ILQLQDIKKL CSLLVVTSRD ARKTHAEKER KFGEPAERND 420 LKLPVSEPSQ RTDCSQKDGG ISGDHFCRIG SQRDETSSSA SDVDNKQNER PMSPGTLALL 480 CDERDSLFLE EGLQEGTTER TRITSNNSYR CDSTIYAEQE KLVLTNFCDF LTKLISLTGG 540 STDGTALRPA LRTETRNEQN PVAMDVNGGS KRKEHSEEPY SNGTVAFPAA STKQSSQAVI 600 GGVTSSPDPF LNIGLSIGNG QGEIRDQD

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

METGETVSEV APRKLARQLD FTAACRNSAN AASPEQLRRS SEPRNPSRLQ LELQLRSGLG  60
LECESQSQPQ QSSSVSQKPA QSHSQPPERL VQFPLQLQQP LPQSPVQSSS QMLVKSPPLL  120
PRIPHPAHRP LSPAAQDSQQ ESPISRIRLS SEVKGGTPKK QKRCNCKSSR CLKLYCECYA  180
AGMYCDGCNC TSCQNNVENE AVRQEAVELT LGKNPNAFKP KIDSSPLRLK DCGDEAEAVQ  240
IVGKHYKGCQ CKKSGCLKKY CECFQAGILC SDNCRCKDCR NFEGSEERTA LYHVGHDSMA  300
NIQQAANAAI CGAIGSSGYG VPPTLSRVSM FSGTTNGKSM QGSAKLQQED NRRASAASLP  360
VSAADTANIA LQYSKSPLVN ILQLQDIKKL CSLLVVTSRD ARKTHAEKER KFGEPAERND  420
LKLPVSEPSQ RTDCSQKDGG ISGDHFCRIG SQRDETSSSA SDVDNKQNER PMSPGTLALL  480
CDERDSLFLE EGLQEGTTER TRITSNNSYR CDSTIYAEQE KLVLTNFCDF LTKLISLTGG  540
STDGTALRPA LRTETRNEQN PVAMDVNGGS KRKEHSEEPY SNGTVAFPAA STKQSSQAVI  600
GGVTSSPDPF LNIGLSIGNG QGEIRDQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20110.1	8e-86	CPP family protein