PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86573.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 305aa    MW: 33469.5 Da    PI: 9.92
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.44.7e-19150183134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs C+tt+TplWR+gp+g+k+LCnaCG+++rk +
  OWM86573.1 150 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 183
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MASTSNSLPC PTHHLQGRSE SQLIRDQPQA VVDQHLIPCV RGGSISSSDH HISCEEGQGL  60
SVFPSLDQNS DQEINSHRSD GNGILSIRWM SSKMRIIHKM KKNSPNSTAS EWSSGGNLMK  120
RSEDCEYDHE VVRYAGGSNI STNNGAVRVC SDCNTTTTPL WRSGPRGPKS LCNACGIRQR  180
KARRAMEAAA ATMGMATAAS TDTSSSRTNN HSKLHKKLMD KIPRPNKKHH NHAHQFKRHN  240
TKTNSSPALP HHSAGKKKQY LFDSFAIGLM SETSSSPGFR RVFPEDEAEA AALLLMELSR  300
GLHHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.16e-21GATA family protein