PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86409.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 316aa    MW: 34730.9 Da    PI: 6.791
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-20170220255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp   + k +r++lg+f+ta eAa+a+++a+ kl+g
  OWM86409.1 170 HYRGVRQRP-WGKFAAEIRDP---NrKGTRVWLGTFDTAIEAARAYDRAAFKLRG 220
                 7********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MAASSSSSGE VSTQLEFIKQ LLLGEFSPIG LCNPLHFGDT QWANGVANSV SGSQSSTTAE  60
SELTFSGFHC PNGNGDLFDF ERSSVPTGQS QTTNLFEFES KPQIIDFNFE QKPKINHNQT  120
VARPSQVAKK PSLKISLPNK TEWLQFSCPN QTTQVSGPPA VAATEAEQRH YRGVRQRPWG  180
KFAAEIRDPN RKGTRVWLGT FDTAIEAARA YDRAAFKLRG SKAILNFPLE AGRFESDPEP  240
AAAATADSRK RQHEEETEVK DVAVKKEKVS LPQDAVSHCR DAPLTPSIWT SLWEADVKGI  300
FNVPLLSPLS PQLMVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.11e-50ERF family protein