PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86364.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family SRS
Protein Properties Length: 364aa    MW: 40337.4 Da    PI: 8.6411
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70225.53.7e-083468539
      DUF702  5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv 39
                + +C +CGn a+  C ++ C+ CC      C+ hv
  OWM86364.1 34 KPKCIQCGNVARSRCPYQSCKSCCSRAQNPCHIHV 68
                568*********************99999*****9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MAAASPAQGN TGATTTAGFA AAHTPPKTLR GLNKPKCIQC GNVARSRCPY QSCKSCCSRA  60
QNPCHIHVLK ANATFPDKTP ASSPPLFNQH STEPSSAGSS LRVASLRQLS SNFAQFNNVH  120
MPVRSRKPLT KKDVAAINEW RFSKLKEFQD RNIELENESF DRYLQNVGLL KEVFSVESVA  180
EHSVRDSSET DSNPAPSENS ERMILEMKLK LRSNETRKEN FRKRIQHIVD RGLKKLKKRE  240
VGDDFSDSAD QNGLIKRPKL KTLHVEKTST IVELNEKLSK ARTEEDLKSC LELKAQLLNP  300
QKGSTETASE STEKSHGQVE EDDGVVGQAS AYFQPKLVSP VEIDQQTVNC IDAQFSSLDQ  360
IEGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.11e-104SRS family protein