PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM86137.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 729aa MW: 78640.8 Da PI: 6.0029

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM86137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.5	5.1e-32	254	311	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct ++C+vkkkver + d++++ei+Y+g Hnh+k OWM86137.1 254 EDGYNWRKYGQKQVKGSEYPRSYYKCTNPNCQVKKKVERFH-DGQITEIIYKGAHNHPK 311 7*************************************9.*************85 PP
2	WRKY	103.8	9.7e-33	465	523	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k+v++tYeg+Hnhe OWM86137.1 465 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHDLKYVITTYEGKHNHE 523 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
MEGAATADAM NGSITRPEQS PVPGSCPGSR GVSLSGSIAE RRAAKCGFNV AQISTARFRM 60 SGSLPSLGGS GTPSPCLTIP PGISPTALLD SPIMLPNSQL SPTTGTFSFP PFLDDSPILR 120 SDDEKGSSED SSAIAVRPPS SPVYLTGFPE LGEDQETTAH DRDFLPGNNL MHFEIQPNLP 180 QDHKKFPMNS PSSEEVFGTP DLKPIHMGSE VSSGNDSGGP ALMEKEFVQE EGGGTQDGDP 240 KVPYNALGLV KTSEDGYNWR KYGQKQVKGS EYPRSYYKCT NPNCQVKKKV ERFHDGQITE 300 IIYKGAHNHP KPQLPRRGAT GPVYSLTESM PEIDGGSRTV TFNTEGGPVR RNVQVGHKDV 360 KPVGLEGTSP TSVITEISDP LSSTPPGKGV GVFESEHTPE LSSMLASHDD EEDGALFSAL 420 EEADDDEPES KRRKSENCFV DSSLASRAVR EPRVVIQIES EIDILDDGYR WRKYGQKVVK 480 GNPNPRSYYK CTSAGCSVRK HVERASHDLK YVITTYEGKH NHEVPAARNS GAGNGNPSGG 540 GNLGPLPPPH SQSSALAIPR NPNIVAKPES QVQDLMLFDR KPEFGTEFLR SASLLTNFGN 600 EMKFGASSMY PVKFTPLRSC GSFGLGPGPS PIPQARSMTS VVPDFPSSLP FKFNQPTNIP 660 LTSLDYNGKA SGLARSFLSG QQMKEKDVRF LTPKQEQKDD HFYDSSFPIM DPASASPAAM 720 FPQALVGFP

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

MEGAATADAM NGSITRPEQS PVPGSCPGSR GVSLSGSIAE RRAAKCGFNV AQISTARFRM  60
SGSLPSLGGS GTPSPCLTIP PGISPTALLD SPIMLPNSQL SPTTGTFSFP PFLDDSPILR  120
SDDEKGSSED SSAIAVRPPS SPVYLTGFPE LGEDQETTAH DRDFLPGNNL MHFEIQPNLP  180
QDHKKFPMNS PSSEEVFGTP DLKPIHMGSE VSSGNDSGGP ALMEKEFVQE EGGGTQDGDP  240
KVPYNALGLV KTSEDGYNWR KYGQKQVKGS EYPRSYYKCT NPNCQVKKKV ERFHDGQITE  300
IIYKGAHNHP KPQLPRRGAT GPVYSLTESM PEIDGGSRTV TFNTEGGPVR RNVQVGHKDV  360
KPVGLEGTSP TSVITEISDP LSSTPPGKGV GVFESEHTPE LSSMLASHDD EEDGALFSAL  420
EEADDDEPES KRRKSENCFV DSSLASRAVR EPRVVIQIES EIDILDDGYR WRKYGQKVVK  480
GNPNPRSYYK CTSAGCSVRK HVERASHDLK YVITTYEGKH NHEVPAARNS GAGNGNPSGG  540
GNLGPLPPPH SQSSALAIPR NPNIVAKPES QVQDLMLFDR KPEFGTEFLR SASLLTNFGN  600
EMKFGASSMY PVKFTPLRSC GSFGLGPGPS PIPQARSMTS VVPDFPSSLP FKFNQPTNIP  660
LTSLDYNGKA SGLARSFLSG QQMKEKDVRF LTPKQEQKDD HFYDSSFPIM DPASASPAAM  720
FPQALVGFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	7e-83	WRKY family protein