PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86065.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 291aa    MW: 32377 Da    PI: 5.6706
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-1980128355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  OWM86065.1  80 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 128
                 9*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MCGGAIIAEF IPRRQGAGAG RRVSSEFWPD SDFLTPTSAL EPKQSHFQPD ASALPKRPQL  60
PSGGVQEEKP AVKRQRKNLY RGIRQRPWGK WAAEIRDPRK GVRVWLGTFN TAEEAARAYD  120
REARKIRGKK AKVNFPNEED EAPLPSAPHH HHPHHPSPQL SASYVPEPNW TRKTFNFGYG  180
QLTSGGFNSA IPEPVVVSSE EVVSGSEATY CEPLKAAKEE EGMKVEEAEE DREVQKLSEE  240
LMAYEDYMKF YHIPYLDGQS AAAPASAAQE SVVAELWSFD DDDTPVTSAS N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-32ERF family protein