PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85831.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 781aa MW: 85474.6 Da PI: 8.2068

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85831.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.1	1.4e-31	232	289	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgsefprsYY+Ct+++C+vkk ers d++++ei+Y+g+H+h+k OWM85831.1 232 DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSP-DGRITEIIYKGTHDHPK 289 8**************************************.*************85 PP
2	WRKY	105	4e-33	409	467	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk v++tYeg+Hnh+ OWM85831.1 409 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKSVITTYEGKHNHD 467 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 781 aa Download sequence
MESSPPSSAH ELPLRSSDQE EDSDRSEPSS GAGAPVPPGG SSGARYKLMS PAKLPISRSS 60 GISIPPGLSP TSFLESPVLL SNVKAEASPT TGSLNMHRLL GSSSNLTAKS FSNPKIFAER 120 KPTYFEFKPH SRSNLVPAEM NDQRSEQSAQ TLGQCKSQFF GPVSLTKSDL PVSSNDLTLS 180 SPAQEVASGA GGPTDVESND LNRTEQTDRG IQAVQSDHKV SGPSITSEGL SDDGYNWRKY 240 GQKHVKGSEF PRSYYKCTHP NCEVKKLFER SPDGRITEII YKGTHDHPKP PPGRRFGAST 300 GVPIQEERFD RFSSLNDLEK ATNSSGQTCN GTEPNGTPDL CPVAEIRNCV EGAEMQPDRV 360 HDEVDDDAED DSLSKRRRME AGGEDFTAVV KPIREPRVVV QTISEVDILD DGYRWRKYGQ 420 KVVRGNPNPR SYYKCTNAGC PVRKHVERAS HDPKSVITTY EGKHNHDVPA ARASSHDTAG 480 PSTLSRPSAS RPEGDAISLD LGVGRSSAAG QQQILCSELV EGQIQPNSSN FKVVVPRPRV 540 VYVKVKGNNS AFNSTRDPEC RLAPDQMESI SCNLPKKKRC EQARLSELSN GDPSRSIIER 600 IVQASMPEAS KNHRIITRVF RVRNLSEILD RFEKHREMVK RMACLCDTSH PRNLVDGNEL 660 LLFYGTTISC CSKKKEPSES VSELCNEPNC RVCRVIGSNF DTELTRKFGI RLSRSCEVSS 720 ERATQSSRGR CVKRAVIVCR TIAGTKGGGR DLIRSVADNS SDGIIVLNPN AVLPCFVIVF 780 N

Sequence ? help Back to Top

Protein Sequence Length: 781 aa Download sequence

MESSPPSSAH ELPLRSSDQE EDSDRSEPSS GAGAPVPPGG SSGARYKLMS PAKLPISRSS  60
GISIPPGLSP TSFLESPVLL SNVKAEASPT TGSLNMHRLL GSSSNLTAKS FSNPKIFAER  120
KPTYFEFKPH SRSNLVPAEM NDQRSEQSAQ TLGQCKSQFF GPVSLTKSDL PVSSNDLTLS  180
SPAQEVASGA GGPTDVESND LNRTEQTDRG IQAVQSDHKV SGPSITSEGL SDDGYNWRKY  240
GQKHVKGSEF PRSYYKCTHP NCEVKKLFER SPDGRITEII YKGTHDHPKP PPGRRFGAST  300
GVPIQEERFD RFSSLNDLEK ATNSSGQTCN GTEPNGTPDL CPVAEIRNCV EGAEMQPDRV  360
HDEVDDDAED DSLSKRRRME AGGEDFTAVV KPIREPRVVV QTISEVDILD DGYRWRKYGQ  420
KVVRGNPNPR SYYKCTNAGC PVRKHVERAS HDPKSVITTY EGKHNHDVPA ARASSHDTAG  480
PSTLSRPSAS RPEGDAISLD LGVGRSSAAG QQQILCSELV EGQIQPNSSN FKVVVPRPRV  540
VYVKVKGNNS AFNSTRDPEC RLAPDQMESI SCNLPKKKRC EQARLSELSN GDPSRSIIER  600
IVQASMPEAS KNHRIITRVF RVRNLSEILD RFEKHREMVK RMACLCDTSH PRNLVDGNEL  660
LLFYGTTISC CSKKKEPSES VSELCNEPNC RVCRVIGSNF DTELTRKFGI RLSRSCEVSS  720
ERATQSSRGR CVKRAVIVCR TIAGTKGGGR DLIRSVADNS SDGIIVLNPN AVLPCFVIVF  780
N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-138	WRKY family protein