PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85744.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 228aa    MW: 25648.1 Da    PI: 5.778
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.99.7e-1076123454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE+ RR+r+N++f  L  +l +    +s K +K +iL  A++ + +L
  OWM85744.1  76 TKACREKLRRERLNDRFLDLSAVLEPG---RSCKTEKPAILDDAIRVLTQL 123
                 6789**********************9...9***************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MDPMELEDDS CWDFLDCSFF DDGSSPVPPS LWPNSRSAGV SADLSSSGVV PPESECSGRQ  60
CTRKRARGEA CSRPGTKACR EKLRRERLND RFLDLSAVLE PGRSCKTEKP AILDDAIRVL  120
TQLKSESQEL KETNEKLLEE IKCLKVEKNE LREEKLTLKA DKERMEQQLK TMSIPPTGFV  180
PTHPAAYHHP VVNKMAVYPS YGLIPMWQYM PPSARDTSSD HELRPPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.24e-77bHLH family protein