PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85570.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 507aa MW: 54589.8 Da PI: 6.6246

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85570.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.1	2.4e-30	268	326	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt++ gCpv+k+v+r++ed +++++tYeg+Hnh+ OWM85570.1 268 NDGCQWRKYGQKMAKGNPCPRAYYRCTMSaGCPVRKQVQRCQEDRSILTTTYEGHHNHP 326 8*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MSFGAGSPSN NEEDRVVVNE LDFFSDERKV TPRGDAGARF PIEKETSSHE SDVNTGLRLV 60 SDSRSEKSSD EGRSLSDVAD KLGRNELGHL HAELQLMNLE NRRLKEMLVQ ACNSYNALQA 120 HLATLMQPQQ NNLGPTAAQH ENNVERKLLE KKKSEAIALK NLLDSGDSIA PRAQDIAGNL 180 LTDKKIRGES QSPCNNIMES SAPSHKSLDG YPDGKRSGSP IDFEAQDCKP NKNARLSNGT 240 TVDQPSADVT MRKTRVSVRA ISEASMINDG CQWRKYGQKM AKGNPCPRAY YRCTMSAGCP 300 VRKQVQRCQE DRSILTTTYE GHHNHPLPPA AMSMASATTA AASMLLSRSM SSSDSGNFVN 360 PNFLGRAILP CTSSMATISA SAPFPSVTLD LTHSPNLQTA QTPHLQFPFP GQETLIYNNQ 420 SQFSGLQLMS DHHQAQPSQP VPPVAADTVL SAATAAIAAD PNFTAALAAA ISSIIGGAHP 480 NPNSSATSLS DPGSETANAV FDRYEQQ

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MSFGAGSPSN NEEDRVVVNE LDFFSDERKV TPRGDAGARF PIEKETSSHE SDVNTGLRLV  60
SDSRSEKSSD EGRSLSDVAD KLGRNELGHL HAELQLMNLE NRRLKEMLVQ ACNSYNALQA  120
HLATLMQPQQ NNLGPTAAQH ENNVERKLLE KKKSEAIALK NLLDSGDSIA PRAQDIAGNL  180
LTDKKIRGES QSPCNNIMES SAPSHKSLDG YPDGKRSGSP IDFEAQDCKP NKNARLSNGT  240
TVDQPSADVT MRKTRVSVRA ISEASMINDG CQWRKYGQKM AKGNPCPRAY YRCTMSAGCP  300
VRKQVQRCQE DRSILTTTYE GHHNHPLPPA AMSMASATTA AASMLLSRSM SSSDSGNFVN  360
PNFLGRAILP CTSSMATISA SAPFPSVTLD LTHSPNLQTA QTPHLQFPFP GQETLIYNNQ  420
SQFSGLQLMS DHHQAQPSQP VPPVAADTVL SAATAAIAAD PNFTAALAAA ISSIIGGAHP  480
NPNSSATSLS DPGSETANAV FDRYEQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	8e-94	WRKY family protein