PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM85486.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | bHLH | ||||||||
Protein Properties | Length: 135aa MW: 14656.4 Da PI: 7.5009 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.2 | 4.4e-11 | 90 | 117 | 3 | 30 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 3 rahnerErrRRdriNsafeeLrellPka 30 r+h+e+E+rRR+riNs +++Lr+llP + OWM85486.1 90 RNHKEAEKRRRARINSHLDKLRSLLPCN 117 58************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MMPENSSESS NLYQLLAGAG LIDAAGPCGF PGASGAGSMQ AAAAAMALQQ SFCSSSSNNY 60 YNPLFDVSSS GGFSENNTNS PEDRTLAALR NHKEAEKRRR ARINSHLDKL RSLLPCNSKV 120 HIDMNVHIYI YMYIY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56770.1 | 3e-15 | bHLH family protein |