PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85472.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 297aa    MW: 33591.7 Da    PI: 8.0855
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.81.1e-1494146155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn+ Er RR++iN  ++ Lr+llP  +   + kKls  +++ ++ +YI +Lq
  OWM85472.1  94 KKLNHNASERDRRRKINGLYSSLRSLLPAsD---QTKKLSIPSTVSRVLKYIPELQ 146
                 6789*************************55...8888***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MLALSPPLFS SNGWLVDDSM SHQQQQQQPP QQPPADYYQQ HFSGIPKELL SPPQQSLLHF  60
YFSQPSDDHP QQLDCFDPVT PSPKAASGDP SMVKKLNHNA SERDRRRKIN GLYSSLRSLL  120
PASDQTKKLS IPSTVSRVLK YIPELQQQVQ KLAKEKEDLL MRIPSKNEAE EDSPSAYYRG  180
GLGIRQRTNS SASPEVVADE RRSVSANRLS EREVAVQIST KKETESPLPE ILLNLERDGF  240
SLVNASTFES FGDNRVFYNL HVQDERINAS DCDKVREKIL SLCRKSDRVL PKRPGIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.14e-51bHLH family protein