PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85386.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 331aa    MW: 36240 Da    PI: 5.2536
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.1e-13123174155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  OWM85386.1 123 QRMTHIAVERNRRKQMNEYLSVLRSLMPDS---YVQRGDQASIIGGAINFVKELE 174
                 79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MALETVFFPQ DPFGCYSGKE LYGLLGDGGG GGGNISAFFD DFEVPLDFDN SFLDSSMDRL  60
DGSSGGSGPG GGQLHMGDQS SLSPYPNYSC SSSQVEVEAA VVGERPKRRR GKSKKNKEDI  120
ENQRMTHIAV ERNRRKQMNE YLSVLRSLMP DSYVQRGDQA SIIGGAINFV KELEQQLHIL  180
GARKQFEHPD QGLPSDPIPL PFSDCFTVPQ YSSIAAVSHE VQPATIVGEV EPAAAVAAQP  240
NEVADIEVTM VESHANMKIR SKRRPKQLLR LVSGLQALRL TVLHLNVSTI RQVVLYSLSL  300
KVEDDCKLTT VDEIASAVYR ILVRIQEEAG V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124135RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.18e-71bHLH family protein