PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM85352.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | NF-YB | ||||||||
Protein Properties | Length: 166aa MW: 18576.6 Da PI: 5.0952 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 159 | 7.6e-50 | 3 | 95 | 2 | 94 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 eq+r+lPian++rimk++lPa akisk+ak+tvqec++efisfvt+eas+kcq+e+rkt+ngdd++wal+tlGf+dy+ ++ yl++yre OWM85352.1 3 DEQERMLPIANIGRIMKQMLPASAKISKEAKQTVQECATEFISFVTGEASEKCQKENRKTVNGDDICWALSTLGFDDYARAMMRYLQRYREQA 95 59****************************************************************************************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MADEQERMLP IANIGRIMKQ MLPASAKISK EAKQTVQECA TEFISFVTGE ASEKCQKENR 60 KTVNGDDICW ALSTLGFDDY ARAMMRYLQR YREQADKDRS SSSSSVAANR PQTGNDGQIT 120 IRRSSEELFL GSNGKTSSNS SHQQEEETDR NAPPTLEFGI INEKNV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 2e-51 | NF-YB family protein |