PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM85285.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 265aa MW: 29187.1 Da PI: 9.677 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.6 | 2.2e-32 | 186 | 244 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+++r a+d +v++tYeg+Hnh+ OWM85285.1 186 LDDGYRWRKYGQKAVKNSSHPRSYYRCTHHTCNVKKQIQRLATDSGIVVTTYEGKHNHP 244 59********************************************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 265 aa Download sequence |
MKTLCLFSYK YGTLHSISNL PPTSNPNLGT LESEQIALFQ FGMENGKVPL LPLALDLGTS 60 SSIHPSAINS LQIPSLLLPP NLLQEYCQLS NLDVEWVNNF LFGSMTKFGI NNDSQKPTSP 120 APADNASLTS MVGANNVVGR EGNNTNDGSL GAAGSRVTDN RKVTGRSKKS VPQRVAFHTR 180 SADDVLDDGY RWRKYGQKAV KNSSHPRSYY RCTHHTCNVK KQIQRLATDS GIVVTTYEGK 240 HNHPSEKLME TLAPLLKQLQ LLTRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G64000.1 | 2e-48 | WRKY family protein |