PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85256.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 343aa    MW: 37373.1 Da    PI: 4.7861
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85256.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.8e-19117166255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  OWM85256.1 117 KFRGVRQRP-WGKWAAEIRDPM----RrVRLWLGTYDTAEEAAIVYDNAAIQLRG 166
                 89*******.**********83....46*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
METSNSVLPP VKFTEHWSHT RLVSSEPLRN PGSCPDLKPR TVRISFTDAD ATDSSSDEEC  60
GSGSLFPRRR VKKFVHEITV DSCAKRSDVV SPSRSKRKSK SGLSAGRRDL KSPPGRKFRG  120
VRQRPWGKWA AEIRDPMRRV RLWLGTYDTA EEAAIVYDNA AIQLRGPDAL TNFSSPPTPV  180
KPLPEKKAPA EAASTSSGYN SGDESQAARS PTSVLRCQLS PPGSNEEAES QSAAPSFHSG  240
ENLVPEEASC SVSENFSEFS DYSPFDSLLA GDMFDFQSSV PGLFDDDPGF GESVLKQEYY  300
ADLFVNPGED LGFGSGFGSS TWNLDDHFQD IGDIFGSDPL VTV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.11e-62ERF family protein