PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85239.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 367aa    MW: 40395.6 Da    PI: 5.6146
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.33.2e-28134193258
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                 dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs++d +v+eitY+g+H++
  OWM85239.1 134 DDGYSWRKYGQKDILGAKYPRSYYRCTYRntqNCCATKQVQRSDDDHTVFEITYRGKHTC 193
                 8***************************98899*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MEGGWSYEQK TLISELIQGA NLAKQLRAHL SSASSAETRE VLINGIINSF EKALMVLKWS  60
GPVACQPQRV PAPAVGASGI PGSPLSVNGS PCSDDFDRSA AVREQFDCRD TKMLPKWTDQ  120
VRISPDTGLE GPQDDGYSWR KYGQKDILGA KYPRSYYRCT YRNTQNCCAT KQVQRSDDDH  180
TVFEITYRGK HTCLQGGPST PAPPSPEKQE LKQVTHGNHQ QDQSQDALAR FRNGLRVDTE  240
NLDGSNITEM PRPFSFRSSS FGFVHGETHS SSGLANNTGN HGGNLSSPFL SPSTPESNYF  300
SLSPCPMTEF GQIHNRYRSE SDPAEIISAT NSSANSPILD LDFSLEEVGI EPNFPFNTDG  360
FLPKLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.11e-71WRKY family protein