PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84846.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 1643aa MW: 183864 Da PI: 6.1411

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	1334	1391	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkg ++prsYY+Ct+++C++kkkvers+ed++++ei+Y+g+Hnh+k OWM84846.1 1334 DDGYNWRKYGQKQVKG-KNPRSYYKCTYPNCSTKKKVERSSEDGQITEIVYKGTHNHPK 1391 8************9.68************************************85 PP
2	WRKY	103.3	1.4e-32	1482	1540	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+agCpv+k ver+a+d ++v++tYeg+Hnh+ OWM84846.1 1482 LDDGYRWRKYGQKVVKGNPNPRSYYKCTYAGCPVRKLVERAAHDMRAVITTYEGKHNHD 1540 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1643 aa Download sequence
MGNARSRNSE LRQSKDSSPD GEEVDEELLS GIRGTRLYSF QELLRATDNF SSNNKIGTGA 60 FGSTYKGALQ DGTVIAVKVV SGGSAEGERE FLNEISILAR TDHENLVKFY GCCVEANHRI 120 LVFDYLKNGD LAQALLCSGP RSINFPWDVR RRICIGIAKG LAFLHDVRIV HRDIKAANVL 180 LDDELNPKIS DFGIATFLAP DRSRVTERVV GTMGYLAPEY AMRGLLTLEA DTYSFGVLVL 240 EIVSGRRHTS GEGKYILERA WDLHKMGELL SLVDKAIMGD FDREEAYKYL ITCLLCTQND 300 LDLRPDMSTV IDMLTGKKDV SGESLLRPGP PSPHMSPGAD EGEMLESDYS YSPGSISSAS 360 LHFSGPLWTR EKDGCPSLMY SKEVKSSYPD STASLITVFT YKKMKKITGN FKQSISAGHH 420 RIFLGFISKE LPVASEPLQV AVKTYDGDDR LYRDKDNWLA QVSLFEKLSH PNLVQLIGYC 480 YEAKHRILMY KYMARGSLAD NLFSKEQSPL SWDVRMKIAI DAAIGLAYLH RSERPVIHRN 540 IKPSKILLDS DYNGKIFGFG LATAGPEGYE SEISDIVVGT LGYIAPEYFR TGRVSAKSDV 600 YSFGVVLVEL ISGRKWRELL LEKPGGLVEL TREFLEEERS LHALMDARLK ENYPIQGAKE 660 VVKLAKKCLD ENPQQRPFMR EIVDCLNCLP EHGTSSLVGG LKTVEKVQKV VRSYGSTSQS 720 QAMNLGTQVE DRGTILMQAG LKWTEAPTPE KWLSAEEIYL MQSQVTELPE GPRCQTLKAL 780 YLHRNCKLRT IPTSFFEYMP ALQVLNLSRT RIKTLPESFF QLFSLKKLFL NHCELLTVLP 840 PKIGELKQLE VLDLHGTEII NLPEEVVKLT NLGCLELSFC GDIKSERNES ESNVLFPEGT 900 ISALSKLEEL SIDVDPEDER WERSIKAIFD EICGLRMLNT LKLYVPYVEH LMNFNLYSMP 960 IDCFKFTVGH HANRIMSRFP QDLQYELEQW DRCLKYVNGV GAPTDIKKVL HHATAFFLDR 1020 HATATKLSEF GIENMQQLKC CIIGECNEVR YLLDGFDFSE EESNSEIVSE YTFAGHSLGS 1080 LEFLYVYYMK SLKKIFTGPY RKCFCNLKYL TLQTCPQLAI IFTPESLGDL SNLEELTVED 1140 CDVVTSLVTC EDSTAYENSC FLPKLKKMSL HYLPRLVSIS HGLRMAPDLE LISLCYCPML 1200 SFSIEEVGNK HSTKIKEEES LTLSIISSFE SLEGKSVEGD SSKGKSVQKE ISQSRGSEEK 1260 SIEGDAEPSQ SSQGIMEENI RLSSQLPVKI THIRASQQQR LTSVSSLLPR LAEHSLQPPV 1320 PDAKSIVSNV EESDDGYNWR KYGQKQVKGK NPRSYYKCTY PNCSTKKKVE RSSEDGQITE 1380 IVYKGTHNHP KPQSTRRKGS QAIQAHAHTS SEFSDQSVTV QEDSSVLMGN EEFEQVSNSV 1440 GDDSESESEA KRWKDANEYI NVSGAVKEPR IVVQTTSEID ILDDGYRWRK YGQKVVKGNP 1500 NPRSYYKCTY AGCPVRKLVE RAAHDMRAVI TTYEGKHNHD PPVGRGGGSQ SVDRAQVTGE 1560 SLQRRSGDIT SALPLGGVAN QSEESLQRSS AATSALPSRG VADQSEESLQ RSCANTAALP 1620 PGVANQSEIS EKLVKSYEST KLM

Sequence ? help Back to Top

Protein Sequence Length: 1643 aa Download sequence

MGNARSRNSE LRQSKDSSPD GEEVDEELLS GIRGTRLYSF QELLRATDNF SSNNKIGTGA  60
FGSTYKGALQ DGTVIAVKVV SGGSAEGERE FLNEISILAR TDHENLVKFY GCCVEANHRI  120
LVFDYLKNGD LAQALLCSGP RSINFPWDVR RRICIGIAKG LAFLHDVRIV HRDIKAANVL  180
LDDELNPKIS DFGIATFLAP DRSRVTERVV GTMGYLAPEY AMRGLLTLEA DTYSFGVLVL  240
EIVSGRRHTS GEGKYILERA WDLHKMGELL SLVDKAIMGD FDREEAYKYL ITCLLCTQND  300
LDLRPDMSTV IDMLTGKKDV SGESLLRPGP PSPHMSPGAD EGEMLESDYS YSPGSISSAS  360
LHFSGPLWTR EKDGCPSLMY SKEVKSSYPD STASLITVFT YKKMKKITGN FKQSISAGHH  420
RIFLGFISKE LPVASEPLQV AVKTYDGDDR LYRDKDNWLA QVSLFEKLSH PNLVQLIGYC  480
YEAKHRILMY KYMARGSLAD NLFSKEQSPL SWDVRMKIAI DAAIGLAYLH RSERPVIHRN  540
IKPSKILLDS DYNGKIFGFG LATAGPEGYE SEISDIVVGT LGYIAPEYFR TGRVSAKSDV  600
YSFGVVLVEL ISGRKWRELL LEKPGGLVEL TREFLEEERS LHALMDARLK ENYPIQGAKE  660
VVKLAKKCLD ENPQQRPFMR EIVDCLNCLP EHGTSSLVGG LKTVEKVQKV VRSYGSTSQS  720
QAMNLGTQVE DRGTILMQAG LKWTEAPTPE KWLSAEEIYL MQSQVTELPE GPRCQTLKAL  780
YLHRNCKLRT IPTSFFEYMP ALQVLNLSRT RIKTLPESFF QLFSLKKLFL NHCELLTVLP  840
PKIGELKQLE VLDLHGTEII NLPEEVVKLT NLGCLELSFC GDIKSERNES ESNVLFPEGT  900
ISALSKLEEL SIDVDPEDER WERSIKAIFD EICGLRMLNT LKLYVPYVEH LMNFNLYSMP  960
IDCFKFTVGH HANRIMSRFP QDLQYELEQW DRCLKYVNGV GAPTDIKKVL HHATAFFLDR  1020
HATATKLSEF GIENMQQLKC CIIGECNEVR YLLDGFDFSE EESNSEIVSE YTFAGHSLGS  1080
LEFLYVYYMK SLKKIFTGPY RKCFCNLKYL TLQTCPQLAI IFTPESLGDL SNLEELTVED  1140
CDVVTSLVTC EDSTAYENSC FLPKLKKMSL HYLPRLVSIS HGLRMAPDLE LISLCYCPML  1200
SFSIEEVGNK HSTKIKEEES LTLSIISSFE SLEGKSVEGD SSKGKSVQKE ISQSRGSEEK  1260
SIEGDAEPSQ SSQGIMEENI RLSSQLPVKI THIRASQQQR LTSVSSLLPR LAEHSLQPPV  1320
PDAKSIVSNV EESDDGYNWR KYGQKQVKGK NPRSYYKCTY PNCSTKKKVE RSSEDGQITE  1380
IVYKGTHNHP KPQSTRRKGS QAIQAHAHTS SEFSDQSVTV QEDSSVLMGN EEFEQVSNSV  1440
GDDSESESEA KRWKDANEYI NVSGAVKEPR IVVQTTSEID ILDDGYRWRK YGQKVVKGNP  1500
NPRSYYKCTY AGCPVRKLVE RAAHDMRAVI TTYEGKHNHD PPVGRGGGSQ SVDRAQVTGE  1560
SLQRRSGDIT SALPLGGVAN QSEESLQRSS AATSALPSRG VADQSEESLQ RSCANTAALP  1620
PGVANQSEIS EKLVKSYEST KLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-86	WRKY family protein