PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84568.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 360aa    MW: 38915.4 Da    PI: 7.25
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.80.000232242621255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R +++ ++++ L +l+ +      +K + a++L +A+ YI+ Lq
  OWM84568.1 224 RKEKLGDRISALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 262
                 67788899999****9998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MNRGVLSSPV MAGGNPSSWP WNINGMRPLA APQSSPFMAT ANSYLFSGHH QYLVPASSLP  60
FQPAWHDSQE FPESLSQLMI MGGLVGEEAD KSAMSNSFQP SKLRLENWEE QVLLHNSPNS  120
HTSIDVKQED SASSYVYGHA NSSDNYPGST TKSSNWAPSV VSASSPKSCV TSLSTGVLDF  180
SSKKTDGRHP PPDRSSECNS NVTGGAAKKA KVQPSSSQST FKVRKEKLGD RISALHQLVS  240
PFGKTDTASV LLEAIGYIRF LQNQIEALSL PYLGNASGSM RHPQSVRGER NCIFPEDPGQ  300
LLNGNCMKRK LEAPEQDAQE EPKMDLRSRG LCLVPVSCTL QVGSDNGADY WASAFSGGFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.14e-96bHLH family protein