PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84163.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family LBD
Protein Properties Length: 213aa    MW: 23042.2 Da    PI: 6.8762
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84163.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260136.21.2e-42481471100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da++s+vyeA ar+rdPvyG++g i +lq+q+++l+a+la++++
  OWM84163.1  48 PCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQDLPESQRADAVASMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQA 146
                 7***********************************************************************************************998 PP

      DUF260 100 e 100
                 e
  OWM84163.1 147 E 147
                 7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MESTDNSTTV TNTSTPTSSS PGSLSPSSRS SSPPPPPPQP APPVIISPCA ACKILRRRCA  60
EKCVLAPYFP PTEPAKFTIA HRVFGASNII KFLQDLPESQ RADAVASMVY EASARIRDPV  120
YGCAGAICQL QKQVSELQAQ LAKAQAEIVN MQCQQANLVA MLCMEMAAQT SHPPMLQHLS  180
DTSLNSPRSH QNSPSFLDDA TNPSLFWEQM LWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.19e-68LBD family protein