PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84085.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 233aa    MW: 25119.1 Da    PI: 4.8345
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.3e-194090155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s+ykGVr +k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  OWM84085.1 40 SKYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 90
                89*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MKPNVTGGSC SGAAGAPLDP EDHSSSLPSP SSSTSSPSSS KYKGVRKRKW GKWVSEIRLP  60
NSRERIWLGS YDSAEKAARA FDAALFCLRG QNAKFNFPSS PPDIVGAHNL SPQEIQAVAA  120
RFANEHHPGP EGESSIDEPP RSSGVAAQGS GGNSIDWSFL GALHENEGRV SDFGFLYSEM  180
EYMIGSHQLH SPLAMDSDVR DGHDEDDHDH DDNDDGSGSG GNYTYQSSFL WNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14349KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.14e-46ERF family protein