PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84071.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

FAR1

Protein Properties

Length: 744aa MW: 85796.7 Da PI: 6.9678

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84071.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.2	1.5e-24	59	145	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 YneYA+e GFs+rk+ks++ + ++ i ++++vCskeg++e+ + + e+ + +r rtgCka+++ + + d++w+vt++ eHnHela OWM84071.1 59 LYNEYAYEKGFSIRKAKSRYYEGTRLIRQKEYVCSKEGFKEDPTPS-ETPSYNRLDVRTGCKAMIRFTVK-DDEWKVTHFIAEHNHELA 145 6***************************************9998.99999*************9.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 744 aa Download sequence
MEKGKETTNE EERPVEVDEG ELTNIELSAS TVSRGLIDDF ANDNLLGKIV RSEEEAYTLY 60 NEYAYEKGFS IRKAKSRYYE GTRLIRQKEY VCSKEGFKED PTPSETPSYN RLDVRTGCKA 120 MIRFTVKDDE WKVTHFIAEH NHELASTEER HLLRSARNFR RPKPRLLNSV ETLTLTTENT 180 GFVQRDQNPA SEQNLVFIEG GDAQSLCQWF KKKKNGDIMF FHDVQLDQEG RVTNFFWCDG 240 RSRIDYGYFG DVVVFDTTYR INKYNLICAP FFGINHHRAK VMFGCAFLLD ETSTSFIWLF 300 KSFLESMGNK APRTIVTYQD DAALIQAVEE VFPDTSHIIC PWHIVKKASS HLAGLYSNPA 360 FAQLFRKCVQ QCNMESEFEE TWQRMVEEYD CKNHSWLKTI YRYRQKWSTA FSSNSFSCGV 420 ISSQRNECVD IFGGISSSKI TCLTRFAIEV DELVARWRDS ELKSNFRCKQ GAPPLVIKKS 480 SICHQAAQIY THKIFELFEQ EYLEGVGALR CTELSSSGTL CTYRMVGDMD DQKEHIVQFD 540 SSALNISCSC KKFECMGILC SHCLSCLHMK NVNAIPHQYI LKRWTKSARD RAPSHDLMDT 600 NRRETEVEYH TEMMRWAYDM ITRSQKSPIT RVLLRDSFRQ IDQELKRVEA DLELNVANNA 660 QASGNSGKRK KNASNESLKS RKINDRAVDN SVQANAHANI PFDIVNLNQG SIDLSTAPFY 720 PFSPQYLQHA HFAAQEAEQF QRNN

Sequence ? help Back to Top

Protein Sequence Length: 744 aa Download sequence

MEKGKETTNE EERPVEVDEG ELTNIELSAS TVSRGLIDDF ANDNLLGKIV RSEEEAYTLY  60
NEYAYEKGFS IRKAKSRYYE GTRLIRQKEY VCSKEGFKED PTPSETPSYN RLDVRTGCKA  120
MIRFTVKDDE WKVTHFIAEH NHELASTEER HLLRSARNFR RPKPRLLNSV ETLTLTTENT  180
GFVQRDQNPA SEQNLVFIEG GDAQSLCQWF KKKKNGDIMF FHDVQLDQEG RVTNFFWCDG  240
RSRIDYGYFG DVVVFDTTYR INKYNLICAP FFGINHHRAK VMFGCAFLLD ETSTSFIWLF  300
KSFLESMGNK APRTIVTYQD DAALIQAVEE VFPDTSHIIC PWHIVKKASS HLAGLYSNPA  360
FAQLFRKCVQ QCNMESEFEE TWQRMVEEYD CKNHSWLKTI YRYRQKWSTA FSSNSFSCGV  420
ISSQRNECVD IFGGISSSKI TCLTRFAIEV DELVARWRDS ELKSNFRCKQ GAPPLVIKKS  480
SICHQAAQIY THKIFELFEQ EYLEGVGALR CTELSSSGTL CTYRMVGDMD DQKEHIVQFD  540
SSALNISCSC KKFECMGILC SHCLSCLHMK NVNAIPHQYI LKRWTKSARD RAPSHDLMDT  600
NRRETEVEYH TEMMRWAYDM ITRSQKSPIT RVLLRDSFRQ IDQELKRVEA DLELNVANNA  660
QASGNSGKRK KNASNESLKS RKINDRAVDN SVQANAHANI PFDIVNLNQG SIDLSTAPFY  720
PFSPQYLQHA HFAAQEAEQF QRNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-100	FAR1 family protein