PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM84059.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24745.2 Da PI: 4.3229 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.3 | 3.3e-17 | 23 | 72 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr +k +g+Wv+eIr p++ r r++lg++++a++Aa+a +aa +l+g OWM84059.1 23 KYKGVRKRK-WGKWVSEIRLPNS---RDRIWLGSYDSADQAARAFDAAQVCLRG 72 7*****999.**********933...5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MVKRAIGKLL SQSSEERRDT DFKYKGVRKR KWGKWVSEIR LPNSRDRIWL GSYDSADQAA 60 RAFDAAQVCL RGPSARLNFP GSSPAIPSGP LTHEEIQSIA ARFANSGIPA EPPMPEASLG 120 SVSEESSEES RAQSESGQIF PDSPSDSISI GSSQVDSTGR SFMDFLVDLD RGSESYKPLD 180 YGIFPGFDDF TDDYYTQTIP ITEFGEEKFD DFSGQEFFLW DY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 25 | 31 | KGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 5e-30 | ERF family protein |