PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83967.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 564aa MW: 62724.8 Da PI: 4.7322

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83967.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.1	1.5e-13	314	357	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++N+++ +Lr l+P + Kl+ a+iL A+eYIk+Lq OWM83967.1 314 VAERNRRKKLNDRLYTLRALVPRiS------KLDRASILGDAIEYIKDLQ 357 68*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MISIHPLIER LRPLVGSRGW DYCVVWKLSE DQRSIVWVDC CCGGADGYSP SGAGEEFHFP 60 VSPILPQCKD VMVQHTRSSA CELLSQLPSS LPLDSGIYKQ TLLSHQPRWL NFASSLDSNI 120 REETVGTKVL IPGPGGCLIE LFVTKQVPED PQTLEFAVSQ CSILTEADMA PNNNMDLSFN 180 TDTVNSRSVF MDINDQNDSF IPQVSASAEG QETPLDLPYD IPVDPVRLSS EKRNTGVADE 240 VYSESSMMNI ENMNIEFVEP LSNADMTQRT GNDENKDTVK TENRRSDSAS DCSDQNEDEE 300 NNRNGKRGQS KNLVAERNRR KKLNDRLYTL RALVPRISKL DRASILGDAI EYIKDLQKQA 360 KELQDELEEQ SDVEDGRHVG SSSNHMPSHG SGFNLGPMND PEKAPAGCES SRQNHQNPDN 420 NTFDKPQQME PQVEVAQVDG KEFFVKVFGE HRPGGFVRLM EALDALGLEV TNANVTSFRC 480 LVSNVFTVEK KDSELVQADH IKDSLIELTR NPSAAWQGMN RAPKTAAASG DSLRQLHNQH 540 HHLFPSLLQA HHFLNPPPPS SPSF

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MISIHPLIER LRPLVGSRGW DYCVVWKLSE DQRSIVWVDC CCGGADGYSP SGAGEEFHFP  60
VSPILPQCKD VMVQHTRSSA CELLSQLPSS LPLDSGIYKQ TLLSHQPRWL NFASSLDSNI  120
REETVGTKVL IPGPGGCLIE LFVTKQVPED PQTLEFAVSQ CSILTEADMA PNNNMDLSFN  180
TDTVNSRSVF MDINDQNDSF IPQVSASAEG QETPLDLPYD IPVDPVRLSS EKRNTGVADE  240
VYSESSMMNI ENMNIEFVEP LSNADMTQRT GNDENKDTVK TENRRSDSAS DCSDQNEDEE  300
NNRNGKRGQS KNLVAERNRR KKLNDRLYTL RALVPRISKL DRASILGDAI EYIKDLQKQA  360
KELQDELEEQ SDVEDGRHVG SSSNHMPSHG SGFNLGPMND PEKAPAGCES SRQNHQNPDN  420
NTFDKPQQME PQVEVAQVDG KEFFVKVFGE HRPGGFVRLM EALDALGLEV TNANVTSFRC  480
LVSNVFTVEK KDSELVQADH IKDSLIELTR NPSAAWQGMN RAPKTAAASG DSLRQLHNQH  540
HHLFPSLLQA HHFLNPPPPS SPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-130	bHLH family protein