PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM83896.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 292aa    MW: 31875.6 Da    PI: 7.3655
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM83896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.64e-19224257134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs+Cg+ kTp+WR gp g ktLCnaCG++y++ +
  OWM83896.1 224 CSHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGR 257
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MVASAYLMGQ HSAREDSWFA GLGGGVTAVA GEDFSVDDLL DFSNGELEGG EEGEEKESLS  60
VSSADGIDDD NNSNSGSFSC TGSSDDSESI LAGGLAVPDD DIAQLEWVSR FVDDSLSEFP  120
LLYPTPKWKT ENDVSKIRFQ PVFLKPPRFP SPVPVKTRSK RPRTAKQPST SPQLSESSST  180
SSCSTWSSSS MECLLTIPRR PEGKRIKKTK HTVQTGSVLF QRKCSHCGVQ KTPQWRAGPL  240
GAKTLCNACG VRYKSGRLFP EYRPACSPTF SVEIHSNSHR KVLEMRRKKD VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-52GATA family protein