PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM83833.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 340aa    MW: 37781.6 Da    PI: 6.7873
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM83833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.4e-10148195455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  OWM83833.1 148 SHSLAERARREKISERMKYLQNLVPGC----NKITGKAGMLDEIINYVQSLQ 195
                 8**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MTVLERQRAH LRWQGPHGDF GSHEVPDQPV KLDSGPGNGW PELGSPDIPG EGCANLNLAG  60
RQGSLKKRKF DKMHTTKVDD ENKDKKTRGF PMEDEESKIT QQSNNISKGN CSKRETSACS  120
SKETSKASEI QKTDYIHVRA RRGQATDSHS LAERARREKI SERMKYLQNL VPGCNKITGK  180
AGMLDEIINY VQSLQRQIEF LSMKLAAVNP MIDLNIDNLF AKEAFPICTA SILNIDMSPE  240
INSHINYLQA NPMHQAVSCL GLELGINTSA GHQASITAPL PIPETFLDST IFNQILPSST  300
WESDLQNLYS VDFFQQGRAT SLASQQYTGS VEVSNLKMEM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.12e-67bHLH family protein