PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83754.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 405aa MW: 44305.7 Da PI: 8.0104

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104	9.2e-33	259	314	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+ OWM83754.1 259 KQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 314 79****************************************************97 PP
2	Myb_DNA-binding	45.6	1.6e-14	261	312	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a +qlGg t+k I + m+ g+t ++ks++qky+ OWM83754.1 261 RRCWSPELHRRFVNALQQLGGSqaaTPKQIRELMQvDGLTNDEVKSHLQKYR 312 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MGSLPPELSF DNRPAFVPRT ISDLVRDIAS VADAAERSSK LGDLVRRLED EMRKIDAFKR 60 ELPLCMLLIR DAILTLKLES VQCSASAPLV TQPVTAEFIP LKKDCDDTED ASPKEKEKDS 120 KDESLGPLDL QLCTFDNSKP STVNPPDHPQ QDAKVETKRH ELLPNQSAAE GALKACKSRN 180 GAREFIQLRT FSPPATAVFP RKEDKVELPV HSLSLLTPGI KNSREKPVSA DTRANFGRSL 240 TQTVQSNSRS GAPQQSARKQ RRCWSPELHR RFVNALQQLG GSQAATPKQI RELMQVDGLT 300 NDEVKSHLQK YRLHTRRFPA AAGSPTNQTV CVLGSLWPSR DQSDDAAASK GSTSQSGSPQ 360 GPLQLCGSAG AASTTGGDSM EDDEDSKSES FSWKNHIQRT GKVDV

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MGSLPPELSF DNRPAFVPRT ISDLVRDIAS VADAAERSSK LGDLVRRLED EMRKIDAFKR  60
ELPLCMLLIR DAILTLKLES VQCSASAPLV TQPVTAEFIP LKKDCDDTED ASPKEKEKDS  120
KDESLGPLDL QLCTFDNSKP STVNPPDHPQ QDAKVETKRH ELLPNQSAAE GALKACKSRN  180
GAREFIQLRT FSPPATAVFP RKEDKVELPV HSLSLLTPGI KNSREKPVSA DTRANFGRSL  240
TQTVQSNSRS GAPQQSARKQ RRCWSPELHR RFVNALQQLG GSQAATPKQI RELMQVDGLT  300
NDEVKSHLQK YRLHTRRFPA AAGSPTNQTV CVLGSLWPSR DQSDDAAASK GSTSQSGSPQ  360
GPLQLCGSAG AASTTGGDSM EDDEDSKSES FSWKNHIQRT GKVDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	2e-49	G2-like family protein