PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83592.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 414aa MW: 46016.6 Da PI: 5.3228

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83592.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35	2.6e-11	216	260	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++Er RR++++++f+ Lr ++P++ +K + a+++ +eYIk+L OWM83592.1 216 QPANERERRSHMKERFNDLRMMIPNS-----TKTDRASVVGDSIEYIKEL 260 5899*******************9.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MYEETPCFGP DSNHPSPMVD SAIDFAHGSS SEEKQREPVL RLPVETQQED EDEDEHLPNI 60 GTHLLQEMTN NPCDHLSSLN WGSITAAAAY KMPRVFDTID NEVQGFGALP NTSFPPTPAI 120 FNHFTLQPQS APLLFPSTRT VHDPTFDLNS PLGLHCAPPL ALVRELFQSL PLSGEVLFGD 180 GGEHDIAGEG REEGLVQVQN GGASELRGGR NGTKQQPANE RERRSHMKER FNDLRMMIPN 240 STKTDRASVV GDSIEYIKEL KRTVDELKLL LDRRRCGRER KDGKRQRMDQ DQGDVNSCIT 300 NKLPGDPNMS YSTGLRSSML RRKSKATEVD VRIVDDEVTV KLVLRRKINC LLHVSRVLDE 360 LQLDLQHVAG GQIGDHYSFL FNSKICEGSV FASTIAGKLI DAVDGHYAVA PPDQ

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MYEETPCFGP DSNHPSPMVD SAIDFAHGSS SEEKQREPVL RLPVETQQED EDEDEHLPNI  60
GTHLLQEMTN NPCDHLSSLN WGSITAAAAY KMPRVFDTID NEVQGFGALP NTSFPPTPAI  120
FNHFTLQPQS APLLFPSTRT VHDPTFDLNS PLGLHCAPPL ALVRELFQSL PLSGEVLFGD  180
GGEHDIAGEG REEGLVQVQN GGASELRGGR NGTKQQPANE RERRSHMKER FNDLRMMIPN  240
STKTDRASVV GDSIEYIKEL KRTVDELKLL LDRRRCGRER KDGKRQRMDQ DQGDVNSCIT  300
NKLPGDPNMS YSTGLRSSML RRKSKATEVD VRIVDDEVTV KLVLRRKINC LLHVSRVLDE  360
LQLDLQHVAG GQIGDHYSFL FNSKICEGSV FASTIAGKLI DAVDGHYAVA PPDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	6e-69	bHLH family protein