PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83401.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 603aa MW: 64875 Da PI: 6.7969

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.2	1.1e-30	348	406	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ OWM83401.1 348 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 406 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MDRGWGLTLD SDSLRFFSPA TATSNTPTVA AHRPPSGFLK LLGHTRPADV ALPMFFSAAH 60 QPHLGHRPSF DEERLSRDTA SAVSPPSPPG ENRAVAVGEV DFFSAESKKQ SPRPADEPSA 120 VVKKEIGSEA NMDVNTGLRL LTANNGSDDS MVDDGIGFSV DVENKRAKNE LVQLQGELQR 180 MNAENQKLKE MLSQVSTNYS TLQMHLAAMI HQQQQSHGAE TRQEHEVDEA KSVERKRDQE 240 LVPRQFLDLV PSKTADNEEV WNSSSEERTR NGSKSPGHNM ELASSGHITD QEHGNSTRPE 300 SPDSETQGWV PNKAPKLDVP KAIDQSAEAT MRKARVSVRA RSEAPMITDG CQWRKYGQKM 360 AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DRSILITTYE GNHNHPLPPA AMAMASTTTA 420 AVSMLLSGSM SSSDGAMMNP NLLARAILPC SSSMATISAS APFPTVTLDL THSPNPNLPL 480 QRPQPHQFQI PPQNFPSGQA LPQVFGQALY NQSKFSGLQL SQDTAPNSQS SHQGQASLAD 540 TVNAATAAIT ADPNFTAALA AAISSIIGGG SHPNNGSNNN NNNGNATTSN SNNSNKMNGF 600 LGN

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MDRGWGLTLD SDSLRFFSPA TATSNTPTVA AHRPPSGFLK LLGHTRPADV ALPMFFSAAH  60
QPHLGHRPSF DEERLSRDTA SAVSPPSPPG ENRAVAVGEV DFFSAESKKQ SPRPADEPSA  120
VVKKEIGSEA NMDVNTGLRL LTANNGSDDS MVDDGIGFSV DVENKRAKNE LVQLQGELQR  180
MNAENQKLKE MLSQVSTNYS TLQMHLAAMI HQQQQSHGAE TRQEHEVDEA KSVERKRDQE  240
LVPRQFLDLV PSKTADNEEV WNSSSEERTR NGSKSPGHNM ELASSGHITD QEHGNSTRPE  300
SPDSETQGWV PNKAPKLDVP KAIDQSAEAT MRKARVSVRA RSEAPMITDG CQWRKYGQKM  360
AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DRSILITTYE GNHNHPLPPA AMAMASTTTA  420
AVSMLLSGSM SSSDGAMMNP NLLARAILPC SSSMATISAS APFPTVTLDL THSPNPNLPL  480
QRPQPHQFQI PPQNFPSGQA LPQVFGQALY NQSKFSGLQL SQDTAPNSQS SHQGQASLAD  540
TVNAATAAIT ADPNFTAALA AAISSIIGGG SHPNNGSNNN NNNGNATTSN SNNSNKMNGF  600
LGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-134	WRKY family protein