PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83130.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 458aa MW: 51434.1 Da PI: 4.5734

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83130.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	117.9	6.1e-37	123	214	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Flkk+ye++ed++ + ++sws+ng+sfvv+d++ef+k++LpkyFkh+nf+SF+RQLn+YgF+k+++++ w F+h+ F++gkk ll++i+ OWM83130.1 123 FLKKTYEMVEDPASDAVVSWSRNGKSFVVWDQHEFSKDLLPKYFKHNNFSSFIRQLNTYGFRKIDSDR---------WDFAHEFFQRGKKPLLNNIR 210 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ OWM83130.1 211 RRAR 214 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MGPEATESDF VSGALVRRIE LPLKAKEQTS PLDQEFDGDN RPANTKPTVV IKIEEEEDEG 60 EGEGEGEGDD HGEDPGFNDF TVTSMADCSS GGSSGRAASS SSSAAEALPR PMEGLHEVGL 120 PPFLKKTYEM VEDPASDAVV SWSRNGKSFV VWDQHEFSKD LLPKYFKHNN FSSFIRQLNT 180 YGFRKIDSDR WDFAHEFFQR GKKPLLNNIR RRARASQSHP RRAGMSLTIS ENKRTVDVEA 240 QAEIMKKDGD ELRLEIFKLR QEQEISQNEI SAIEERIRRA ENRHQHMFLF LAKAVRNPNF 300 VQQLIQKKRS SDPEMRQLKM AGGHSKKRPR LQMPIDPEAA EFLIEVMKPN LSDDNQESGG 360 FPASGDGEVT GCELGQEPRN GEITPSEPDC VFSDMSEVYQ VVSDNLLGDI GNVENEEIAE 420 ALKDSNLYLE FEGLIRKSRD WEGYEAEFLE PAAVGAMP

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MGPEATESDF VSGALVRRIE LPLKAKEQTS PLDQEFDGDN RPANTKPTVV IKIEEEEDEG  60
EGEGEGEGDD HGEDPGFNDF TVTSMADCSS GGSSGRAASS SSSAAEALPR PMEGLHEVGL  120
PPFLKKTYEM VEDPASDAVV SWSRNGKSFV VWDQHEFSKD LLPKYFKHNN FSSFIRQLNT  180
YGFRKIDSDR WDFAHEFFQR GKKPLLNNIR RRARASQSHP RRAGMSLTIS ENKRTVDVEA  240
QAEIMKKDGD ELRLEIFKLR QEQEISQNEI SAIEERIRRA ENRHQHMFLF LAKAVRNPNF  300
VQQLIQKKRS SDPEMRQLKM AGGHSKKRPR LQMPIDPEAA EFLIEVMKPN LSDDNQESGG  360
FPASGDGEVT GCELGQEPRN GEITPSEPDC VFSDMSEVYQ VVSDNLLGDI GNVENEEIAE  420
ALKDSNLYLE FEGLIRKSRD WEGYEAEFLE PAAVGAMP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-64	HSF family protein