PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM83117.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 443aa MW: 51111.6 Da PI: 7.5091

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM83117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00068	201	223	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C +rk++L+rH+r++ OWM83117.1 201 YFCEFCLNFMKRKEQLQRHMRKC 223 78*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MGSIDPPKSE DNGSATAAVD LKSIAADGMP PLPAKQSNGT VTEPDAASKR RKASMLPLEV 60 GTRVMCRWRD GKYHPVKVIE RRKLGPNGLC DYEYYVHYTE FNRRLDEWVK LEQLDLDSVE 120 TVVDEKVEDK VTGLKMTRHQ KRKIDETHVE GHEELDAASL REHEEFTKVK NIATIELGRY 180 EIETWYFSPF PPEYNDCSKL YFCEFCLNFM KRKEQLQRHM RKCDLKHPPG DEIYRSGTLS 240 MFEVDGKKNK VYGQNLCYLA KLFLDHKTLY YDVDLFLFYI LCECDDRGCH MVGYFSKEKH 300 SEESYNLACI LTLPPYQRKG YGKFLIAFSY ELSKKEGKVG TPERPLSDLG LLSYKGYWTR 360 VLLDILKKHK GNISIKELSD MTAIKADDIL NTLQSLDLIQ YRKGQHVICA DPKVLDRHLK 420 AAGRGGLEVD VSKLIWTPYR EQG

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MGSIDPPKSE DNGSATAAVD LKSIAADGMP PLPAKQSNGT VTEPDAASKR RKASMLPLEV  60
GTRVMCRWRD GKYHPVKVIE RRKLGPNGLC DYEYYVHYTE FNRRLDEWVK LEQLDLDSVE  120
TVVDEKVEDK VTGLKMTRHQ KRKIDETHVE GHEELDAASL REHEEFTKVK NIATIELGRY  180
EIETWYFSPF PPEYNDCSKL YFCEFCLNFM KRKEQLQRHM RKCDLKHPPG DEIYRSGTLS  240
MFEVDGKKNK VYGQNLCYLA KLFLDHKTLY YDVDLFLFYI LCECDDRGCH MVGYFSKEKH  300
SEESYNLACI LTLPPYQRKG YGKFLIAFSY ELSKKEGKVG TPERPLSDLG LLSYKGYWTR  360
VLLDILKKHK GNISIKELSD MTAIKADDIL NTLQSLDLIQ YRKGQHVICA DPKVLDRHLK  420
AAGRGGLEVD VSKLIWTPYR EQG