PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM83017.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | LBD | ||||||||
Protein Properties | Length: 249aa MW: 27016.7 Da PI: 8.3563 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 86.1 | 4.8e-27 | 4 | 105 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C+vlr++C ++C+++ ++ ++q++++ +++k++G++ +++ll+a p+ r+d+++sl+yeA+ r+ +P+yG++g+++++++ql+q ++e OWM83017.1 4 SCNGCRVLRKGCGDGCPIRHCLrwiktSQSQANATIFLAKFYGRAGLINLLNAGPDPLRHDVFKSLLYEACGRIINPIYGSTGLLWTGSWQLCQDAVES 102 6*********************9999888999**************************************************************99998 PP DUF260 95 all 97 +l OWM83017.1 103 VLN 105 765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MRMSCNGCRV LRKGCGDGCP IRHCLRWIKT SQSQANATIF LAKFYGRAGL INLLNAGPDP 60 LRHDVFKSLL YEACGRIINP IYGSTGLLWT GSWQLCQDAV ESVLNGVPIT RIPDDSALAG 120 SGPPLQACDI RHVSKPNKGS SIRLHRVRSR GGFKRRPATK LAQAESVSRE SELSQGPIRC 180 SESDAVSAET EEASTSQLDE RAPAMEDGLE LELELTLGFD RTAKRACSEG KRTSGDGSEA 240 EKCQLRVGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02550.1 | 6e-75 | LBD family protein |