PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82927.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 512aa MW: 55478.8 Da PI: 7.4761

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.8	4.7e-09	337	384	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq OWM82927.1 337 SHSLAERVRREKISERMKLLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 384 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MENEFFMSAG IQPWRAMELN CASNPSNQCA FYTPDINNWE ASLDQSHNNG VQFDSAISSM 60 VSSPAASNSN NASENALMIR ELIGKLGRIG NGNSNASLAE IPPHSSRPVM PSPAGFSSAN 120 TSCYITPLSS PPKVSLPTMG LNSSVADFSA DPGFAERAAK FSCFGSRSFN GRTNPIGITN 180 PETSPYGLTS STRFPRVSSS PSLKALGPGA RFPAQPTKNN LQQQPVDRSE MASSQEESSV 240 SDQRENGPKG SSDMNSRKRK AALKGKAKES TNAAKVAEAN EDSNAKRCKQ NESNGKENET 300 VKAEEDEKKT KNDAKKPPEP PKDYIHVRAR RGQATDSHSL AERVRREKIS ERMKLLQDLV 360 PGCNKVIGKA LMLDEIINYV QSLQRQVEFL SMKLASVNTS MDLSMDKDMF QSNNSMANPP 420 MFPMDSSAFH GLNISDGTVS HCSADPLSMG GACRSLDAHL PSPNDLQYQN FCGGDLQTIV 480 QMGFGQNSHQ DSAYSLQPFH GRGQTSQMKV EL

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MENEFFMSAG IQPWRAMELN CASNPSNQCA FYTPDINNWE ASLDQSHNNG VQFDSAISSM  60
VSSPAASNSN NASENALMIR ELIGKLGRIG NGNSNASLAE IPPHSSRPVM PSPAGFSSAN  120
TSCYITPLSS PPKVSLPTMG LNSSVADFSA DPGFAERAAK FSCFGSRSFN GRTNPIGITN  180
PETSPYGLTS STRFPRVSSS PSLKALGPGA RFPAQPTKNN LQQQPVDRSE MASSQEESSV  240
SDQRENGPKG SSDMNSRKRK AALKGKAKES TNAAKVAEAN EDSNAKRCKQ NESNGKENET  300
VKAEEDEKKT KNDAKKPPEP PKDYIHVRAR RGQATDSHSL AERVRREKIS ERMKLLQDLV  360
PGCNKVIGKA LMLDEIINYV QSLQRQVEFL SMKLASVNTS MDLSMDKDMF QSNNSMANPP  420
MFPMDSSAFH GLNISDGTVS HCSADPLSMG GACRSLDAHL PSPNDLQYQN FCGGDLQTIV  480
QMGFGQNSHQ DSAYSLQPFH GRGQTSQMKV EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	2e-96	bHLH family protein