PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82665.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

SBP

Protein Properties

Length: 402aa MW: 42499.1 Da PI: 9.6237

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82665.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	136.5	8.2e-43	102	177	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y++rhkvC +hsk+p+v+v g+eqrfCqqCsrfh+l efD+ krsCrrrLa+hnerrrk+ OWM82665.1 102 RCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPKVIVGGIEQRFCQQCSRFHQLAEFDQVKRSCRRRLAGHNERRRKP 177 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MEPGSISLTD SGSSSPPTTT TASSSSPLHH GLKFGRKIYF EDHAPHPPNP PPPPPPAKPV 60 PASASASASS SSSASSSSKK GRGAATAGGG GGGPMQGGQP PRCQVEGCKV DLSDAKAYYS 120 RHKVCGMHSK SPKVIVGGIE QRFCQQCSRF HQLAEFDQVK RSCRRRLAGH NERRRKPPPG 180 SLLASRYGRL STSVFDNSSR SGGFVMDFTA YPRHLARDAW LPPRSSDRGP TNQTSGHGKF 240 PLHHPWQSSS GNPPPPNLFL QGSVGGGSSS LPSPGIPPGE CYTGVAAGST CALSLLSNQP 300 WSASRSQASA LSVNEMFTQQ ENPTTAAPHG ASVSHLPSAL WGFKAGDDSS GIPSELGLGQ 360 FSQPLDSHFP GELELSQQSR RQYMELDHSR AFDSSQQMHW SL

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MEPGSISLTD SGSSSPPTTT TASSSSPLHH GLKFGRKIYF EDHAPHPPNP PPPPPPAKPV  60
PASASASASS SSSASSSSKK GRGAATAGGG GGGPMQGGQP PRCQVEGCKV DLSDAKAYYS  120
RHKVCGMHSK SPKVIVGGIE QRFCQQCSRF HQLAEFDQVK RSCRRRLAGH NERRRKPPPG  180
SLLASRYGRL STSVFDNSSR SGGFVMDFTA YPRHLARDAW LPPRSSDRGP TNQTSGHGKF  240
PLHHPWQSSS GNPPPPNLFL QGSVGGGSSS LPSPGIPPGE CYTGVAAGST CALSLLSNQP  300
WSASRSQASA LSVNEMFTQQ ENPTTAAPHG ASVSHLPSAL WGFKAGDDSS GIPSELGLGQ  360
FSQPLDSHFP GELELSQQSR RQYMELDHSR AFDSSQQMHW SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	2e-57	SBP family protein