PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82569.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

E2F/DP

Protein Properties

Length: 476aa MW: 52360.4 Da PI: 4.616

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	83.2	2.1e-26	150	216	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++ll++ e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg OWM82569.1 150 RYDSSLGLLTKKFITLLKQGEDGILDLNKAAETL---EV-VQKRRIYDITNVLEGIGLIEKKIKNRIRWKG 216 6899****************************...55.5**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MSGGVRAPNR PAPPPAASPA QIFQPPKRHL AFTSTKPPFV PQDDYHRFSS PHNADARRAV 60 APDQEADAVV FRSPLKHKGG VEDNEVVSSL WTNSPGASNL ISSPFQTPVS AKGGWAYSRA 120 KGTRGNKSAP QTPVSNAGSP STLTPAGNCR YDSSLGLLTK KFITLLKQGE DGILDLNKAA 180 ETLEVVQKRR IYDITNVLEG IGLIEKKIKN RIRWKGFDAS RPEELDANAS LLKSEIEKLS 240 LEERAMDDRI REMQEQLRDL SEDENNQKCL FVTEEDIKGL PCFQNETLIA IKAPQGTTLE 300 VPDPDEAVDY PQRRYRIIFR STMGPIDVYL VSQFEEKFEE MNNVEPPSSF PLASGTRSSA 360 STSGEGFNAV SNNAEITESE AYPYQVSLDA NGSNESVGGI MKIVPSDVDN DADYWLLSDV 420 DVSITDMWRT DSGVEWNAMD MLQSDFPVED VGTPRPNSPP SEVAEVPVNT VNSRKR

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MSGGVRAPNR PAPPPAASPA QIFQPPKRHL AFTSTKPPFV PQDDYHRFSS PHNADARRAV  60
APDQEADAVV FRSPLKHKGG VEDNEVVSSL WTNSPGASNL ISSPFQTPVS AKGGWAYSRA  120
KGTRGNKSAP QTPVSNAGSP STLTPAGNCR YDSSLGLLTK KFITLLKQGE DGILDLNKAA  180
ETLEVVQKRR IYDITNVLEG IGLIEKKIKN RIRWKGFDAS RPEELDANAS LLKSEIEKLS  240
LEERAMDDRI REMQEQLRDL SEDENNQKCL FVTEEDIKGL PCFQNETLIA IKAPQGTTLE  300
VPDPDEAVDY PQRRYRIIFR STMGPIDVYL VSQFEEKFEE MNNVEPPSSF PLASGTRSSA  360
STSGEGFNAV SNNAEITESE AYPYQVSLDA NGSNESVGGI MKIVPSDVDN DADYWLLSDV  420
DVSITDMWRT DSGVEWNAMD MLQSDFPVED VGTPRPNSPP SEVAEVPVNT VNSRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-152	E2F/DP family protein