PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM82504.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 184aa MW: 19642 Da PI: 5.7792 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 6e-18 | 21 | 71 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 + y+G+r+++ +g+Wv+eIr+p r r++lg+f t+e+Aa a++ a+++l+g OWM82504.1 21 PVYRGIRRRS-TGKWVSEIREP-----RtpNRIWLGTFPTPEMAAVAYDVAALALRG 71 68*****887.9*********9.....4478************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 184 aa Download sequence |
MYYSNSSRND STGGSSTGRH PVYRGIRRRS TGKWVSEIRE PRTPNRIWLG TFPTPEMAAV 60 AYDVAALALR GRDAELNFPG WAATLPIPAS TSAHDIQVAA TSAAAAIGAA GDALLSQPPR 120 RVAGPERSTP ASGQEFMDEE MIFNTPSMLA NMAEGMLLSP PRLDGANPDF APDAAGDPNL 180 WKFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G36450.1 | 1e-37 | ERF family protein |